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SnoopCGH: Software for visualizing comparative genomic hybridization data

Almagro-Garcia, Jacob, Manske, Magnus, Carret, Celine, Campino, Susana, Auburn, Sarah, MacInnis, Bronwyn L., Maslen, Gareth, Pain, Arnab, Newbold, Christopher I., Kwiatkowski, Dominic P. and Clark, Taane G. (2009). SnoopCGH: Software for visualizing comparative genomic hybridization data. Bioinformatics,25(20):2732-2733.

Document type: Journal Article

IRMA ID 75039815xPUB190
Title SnoopCGH: Software for visualizing comparative genomic hybridization data
Author Almagro-Garcia, Jacob
Manske, Magnus
Carret, Celine
Campino, Susana
Auburn, Sarah
MacInnis, Bronwyn L.
Maslen, Gareth
Pain, Arnab
Newbold, Christopher I.
Kwiatkowski, Dominic P.
Clark, Taane G.
Journal Name Bioinformatics
Publication Date 2009
Volume Number 25
Issue Number 20
ISSN 1367-4803   (check CDU catalogue open catalogue search in new window)
Start Page 2732
End Page 2733
Total Pages 1
Place of Publication United Kingdom
Publisher Oxford University Press
Abstract Summary: Array-based comparative genomic hybridization (CGH) technology is used to discover and validate genomic structural variation, including copy number variants, insertions, deletions and other structural variants (SVs). The visualization and summarization of the array CGH data outputs, potentially across many samples, is an important process in the identification and analysis of SVs. We have developed a software tool for SV analysis using data from array CGH technologies, which is also amenable to short-read sequence data.
DOI http://dx.doi.org/10.1093/bioinformatics/btp488   (check subscription with CDU E-Gateway service for CDU Staff and Students  check subscription with CDU E-Gateway in new window)
 
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